PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.1108 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 279aa MW: 30998.6 Da PI: 7.2206 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.8 | 9.5e-09 | 89 | 131 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++E++RR r+ +++e L+ l+P++ K++ a+i +++Y+++L evm.model.AsparagusV1_07.1108 89 KNEKQRRLRLSNKYEVLKALIPNP-----SKPDRATIISDTINYVQEL 131 68*********************9.....7***************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MMFRMMNLEN VHHDGFIVGD QVPVDAAAMY YDPATMFQSV MGQGGNGGCL VFDDGGYGGV 60 KGVDEEGVAG LGNKRKKRGG HEEGKGGIKN EKQRRLRLSN KYEVLKALIP NPSKPDRATI 120 ISDTINYVQE LLRTVNELKL LVDKKRRCRK SEIQKAEAGG DDVDSTCMKP LQEFKGALRS 180 SWLQRKSRDT HVDVRIVEDE VFIKLTQHKN IDCLLVVARV LDELELEMLH LSGGNIGDLH 240 VFMFNTKIHE GSSVYAGAIA KKIMEAMDIK QDEVSVCF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06170.2 | 4e-53 | bHLH family protein |