PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1108
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 279aa    MW: 30998.6 Da    PI: 7.2206
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1108genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.5e-0989131754
                                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                    ++E++RR r+ +++e L+ l+P++      K++ a+i   +++Y+++L
  evm.model.AsparagusV1_07.1108  89 KNEKQRRLRLSNKYEVLKALIPNP-----SKPDRATIISDTINYVQEL 131
                                    68*********************9.....7***************988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MMFRMMNLEN VHHDGFIVGD QVPVDAAAMY YDPATMFQSV MGQGGNGGCL VFDDGGYGGV  60
KGVDEEGVAG LGNKRKKRGG HEEGKGGIKN EKQRRLRLSN KYEVLKALIP NPSKPDRATI  120
ISDTINYVQE LLRTVNELKL LVDKKRRCRK SEIQKAEAGG DDVDSTCMKP LQEFKGALRS  180
SWLQRKSRDT HVDVRIVEDE VFIKLTQHKN IDCLLVVARV LDELELEMLH LSGGNIGDLH  240
VFMFNTKIHE GSSVYAGAIA KKIMEAMDIK QDEVSVCF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.24e-53bHLH family protein