PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.1058 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 395aa MW: 44220.3 Da PI: 7.236 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.5 | 1.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl evm.model.AsparagusV1_07.1058 14 KGLWSPEEDEKLLKHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.7 | 3.1e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ l++d+++ lG++ W+ Ia+ ++ gRt++++k+ w++ evm.model.AsparagusV1_07.1058 67 RGTFSQQEENLIIDLHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*******************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDEKLLKHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEENLIID LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPNTHKPLS ETEAAEEEKV ATASSNKTST SLPDTAPNPT VHVPPLSLIS SKSESSISST 180 KDFFLESSSS SQASNLMSSF PLTSHNQHLW LNRNNRLLGM NPEFDCNGMS TVIPSVSSSI 240 LLPSMGLKPT INMPPDNSNG IQYWEAGDAS NSSRSSRMEL NSNSSFIDGS MFSWTDLLQD 300 KTSQLNLDEE AEELKWSEYL QGAYPISAAL QNQSQPLYSE IKSESQFSIE GYGSWQQNQQ 360 PQQQQQQQSQ AQLPSSELYN GKDFQRISAV FGHI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.3 | 6e-87 | MYB family protein |