PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.10

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WOX

Protein Properties

Length: 352aa MW: 40067.5 Da PI: 7.4055

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.10	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.9	4.2e-19	21	82	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF + r+p++e+++ ++++l +++ ++V++WFqN++a+e++ evm.model.AsparagusV1_07.10 21 KCGRWNPTAEQVKVLSDLFSSgLRTPTTEQIQMISSHLssfgKIESKNVFYWFQNHKARERH 82 568***************99************************************95 PP
2	Wus_type_Homeobox	106.9	1.2e-34	21	83	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++ RW+Pt+eQ+k+L +l++sGlrtP++e+iq i+++L+++Gkie+kNVfyWFQN+kaRer++ evm.model.AsparagusV1_07.10 21 KCGRWNPTAEQVKVLSDLFSSGLRTPTTEQIQMISSHLSSFGKIESKNVFYWFQNHKARERHH 83 678**********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MEEAVMSGGG LMSSSGRVGT KCGRWNPTAE QVKVLSDLFS SGLRTPTTEQ IQMISSHLSS 60 FGKIESKNVF YWFQNHKARE RHHHKKRRRG GGGDLYCCTT TALKTTPDPK KDARGAGEAT 120 EAAEMVWDRK EREIETLELF PLSSYKLQEE DKWRSLRSEW RSEMALFNAE INDPPLDLRL 180 SFLFEEVAFS FNGGKDSTVL LHLLRAEYYL QKEKTKQSNG NQLDSIPECR IRTIYFETPC 240 AFPEINSFTY ETASNYDLQL EIISLDFKSG LETLMNEKPI KAIFLGTRIG DPNAVGQEQF 300 SPSSLGWPPF MRVNPILDWS YRDVWAFLLT CKTKNAKLRM FLSDSCSRVC V*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MEEAVMSGGG LMSSSGRVGT KCGRWNPTAE QVKVLSDLFS SGLRTPTTEQ IQMISSHLSS  60
FGKIESKNVF YWFQNHKARE RHHHKKRRRG GGGDLYCCTT TALKTTPDPK KDARGAGEAT  120
EAAEMVWDRK EREIETLELF PLSSYKLQEE DKWRSLRSEW RSEMALFNAE INDPPLDLRL  180
SFLFEEVAFS FNGGKDSTVL LHLLRAEYYL QKEKTKQSNG NQLDSIPECR IRTIYFETPC  240
AFPEINSFTY ETASNYDLQL EIISLDFKSG LETLMNEKPI KAIFLGTRIG DPNAVGQEQF  300
SPSSLGWPPF MRVNPILDWS YRDVWAFLLT CKTKNAKLRM FLSDSCSRVC V*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	3e-30	WOX family protein