PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_06.635 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 205aa MW: 23730.4 Da PI: 5.8921 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.2 | 1.6e-07 | 13 | 57 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +WT+ + + +a + + + +W Iar +g R+ +++k ++q evm.model.AsparagusV1_06.635 13 PWTAKQNKMFEQALAVYDQEtpdRWQNIARAVG--RSVEDVKRHYQL 57 8*****************99************8..**********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 205 aa Download sequence |
MASSSLPHSS GSPWTAKQNK MFEQALAVYD QETPDRWQNI ARAVGRSVED VKRHYQLLEE 60 DVRHIESGNV PFPYVQSSRV EPDMMNRAHP SHLFLFNQQL TLSSEMDSWT AEQNKHFEQV 120 LAVYDKDTPD RWQNVAREIG KSVEDVKRQY RLLQEDIKYI ESANFPSFGA CARARDEEQR 180 YNIITKQLAQ PFSSSSVTYI IYDH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75250.1 | 5e-28 | MYB_related family protein |