PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.551
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 297aa    MW: 33513.3 Da    PI: 8.2896
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.551genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.88.1e-1153891148
                                  HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                  llv +v+++G ++W+ Ia+++  gR +kqc++rw+++l
  evm.model.AsparagusV1_06.551 53 LLVGLVEKYGVRRWSHIAQMLT-GRVGKQCRERWHNHL 89
                                  7899*****************9.*************97 PP
2Myb_DNA-binding57.62.8e-1895137145
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                                   ++ WT+eEd+ l++a+ + G++ W+ Ia++++ gRt++++k++w+
  evm.model.AsparagusV1_06.551  95 KDTWTEEEDKVLIQAHSEIGNK-WAEIAKRLP-GRTENSIKNHWN 137
                                   679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEVPLIVIGD LALPMNNCFL PCLDHILLFM GSIHLCLPRT QLADNKLRIG SRLLVGLVEK  60
YGVRRWSHIA QMLTGRVGKQ CRERWHNHLR PNIKKDTWTE EEDKVLIQAH SEIGNKWAEI  120
AKRLPGRTEN SIKNHWNATK RRQFSRRRCC RSSKYFKSGS LLQNYIKSLT STLTTAPTSV  180
LPFDNQKSTT AGNKEEWKGV LSMPLKSITG TYEAPACGGP DLGIENRNVD EGIYDVGHLF  240
DRLEFGAMAS GGSSSSSEGN EDFETAMNWD LMLPLSPENV KREMDLVEMI FENNSF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.16e-51MYB family protein