PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.520
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 299aa    MW: 33178.4 Da    PI: 5.9221
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.520genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding491.4e-151461148
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                  +g+WT+eEd++l++ +   G  +W+++++  g+ R++k+c++rw +yl
  evm.model.AsparagusV1_06.520 14 KGPWTAEEDKKLINFILTNGHCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                                  79******************************99************97 PP
2Myb_DNA-binding52.61e-1670111447
                                   S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                    ++ E++  +d++ qlG++ W++Ia++++ gRt++++k++w+++
  evm.model.AsparagusV1_06.520  70 LSESEEKMVIDLHSQLGNR-WSKIAAHLP-GRTDNEIKNHWNTH 111
                                   5899***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDKKLINFIL TNGHCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SESEEKMVID LHSQLGNRWS KIAAHLPGRT DNEIKNHWNT HIKKKLKKMG  120
IDPLTHKPIS SSSDGQQQTQ EKSAAKDEKA ATEEAQTVGE QNPITLTDPI EADDGFLSKS  180
PAFCTDEVPM IQPHEIIVPA GPSTSSSSTS SSNSNSNSAS SSSSCSNSSK PSAMAEEIQL  240
PCMEWQEAMY LWGFDDLMWW DSSLCCDDIN EGKLALDPLQ SQRSTALFDQ EAWKFELF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.14e-95MYB family protein