PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.464
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family Nin-like
Protein Properties Length: 389aa    MW: 43562.1 Da    PI: 4.4986
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.464genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK64.51.8e-20289338352
                        RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                                   + +++ dl  +F+   ++AA+ L++c+T+LK +CR++ I RWP+Rk+ks+
  evm.model.AsparagusV1_06.464 289 AGMTIMDLLPHFHVRAEEAARRLNICPTTLKIQCRKHKIVRWPYRKVKSI 338
                                   6788999*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MDSPKNLFNN DPDADLRRHL DDYCPEPLPF NAPMDFTRHD NIWPPPIRQD DNFLGYDDSS  60
GDFNFDDFFN YGEYENDVTV EEARGGGGGL HTGNPSSSGT KELGFLLVQP GNVDCSRCIC  120
VSQLSDYTNG LYNMRLTVHA VGTNIDHLVF DAEATDPEVI NGAEAFYLKF EGHSVESVNA  180
YLSNYAIQMN QDGSFVLQDS FIRIYNKLLG GDNDDDREST PENSNEGNDG EGGRAGPDQV  240
PQAIGNQAWV EGPGESSDNV AAEPLGPLSP NPPPRPRRLS VSEQRERTAG MTIMDLLPHF  300
HVRAEEAARR LNICPTTLKI QCRKHKIVRW PYRKVKSIDN RIEGLERTLK EKLNQGRVEE  360
TMAIRDEIER EREKREKLYQ DIVAVALS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.15e-10Nin-like family protein