PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.348

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

ERF

Protein Properties

Length: 582aa MW: 65162.5 Da PI: 5.7631

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.348	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60.1	5.1e-19	105	154	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++a +++++g evm.model.AsparagusV1_06.348 105 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 154 69*****.******954...4**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MCGGAIISDF IPSSRSIKLT ADYLWPSLEK SKKSSSRFDT EDDFEADFNE FKDEESEEEQ 60 SEVIDVKPFQ FRAKSSLSRD GSTAKKSINL DEPANHSSKR KRKNQYRGIR QRPWGKWAAE 120 IRDPRKGVRV WLGTFNTAEE AARAYDAEAR RIRGKKAKVN FPEEASKKPI KPRSLENSNP 180 SPNMDFGYLN TPELDVYSGF DFFEEKVPVV LPSEANELAV GDNNATAMEL SEELNAFESY 240 MKFLQVPYLE GSSDESVDNL LNNEVDNLLN DEVSQDEMGE RGEPERPRPE RDVMGTLYIY 300 SDFYAPLLAK LDFLRDINAY VILKIAALLF GLCFLKGIVI LRLLVADFLP LLALQDTFSN 360 PGGGSEVEAR SVESDRLIWM VRSALVGRVE DSSSLTLLSA AILLILCVLK PKKPVFHLHS 420 IHLNAFKLNV TSAKEISVSC SMASLIFITQ NPNKFGIKYS PSEFGVLYEK VPVGTVDIPK 480 FYQPAHGTNV TVMMYVSIQQ FNLSDLINGT HVEVQILGCM GVQPHVLNFP LARIKVSLDC 540 RIGFDYGIVT LSKGIESIKR HKALLLNNFP HLSQKCSLSL L*

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MCGGAIISDF IPSSRSIKLT ADYLWPSLEK SKKSSSRFDT EDDFEADFNE FKDEESEEEQ  60
SEVIDVKPFQ FRAKSSLSRD GSTAKKSINL DEPANHSSKR KRKNQYRGIR QRPWGKWAAE  120
IRDPRKGVRV WLGTFNTAEE AARAYDAEAR RIRGKKAKVN FPEEASKKPI KPRSLENSNP  180
SPNMDFGYLN TPELDVYSGF DFFEEKVPVV LPSEANELAV GDNNATAMEL SEELNAFESY  240
MKFLQVPYLE GSSDESVDNL LNNEVDNLLN DEVSQDEMGE RGEPERPRPE RDVMGTLYIY  300
SDFYAPLLAK LDFLRDINAY VILKIAALLF GLCFLKGIVI LRLLVADFLP LLALQDTFSN  360
PGGGSEVEAR SVESDRLIWM VRSALVGRVE DSSSLTLLSA AILLILCVLK PKKPVFHLHS  420
IHLNAFKLNV TSAKEISVSC SMASLIFITQ NPNKFGIKYS PSEFGVLYEK VPVGTVDIPK  480
FYQPAHGTNV TVMMYVSIQQ FNLSDLINGT HVEVQILGCM GVQPHVLNFP LARIKVSLDC  540
RIGFDYGIVT LSKGIESIKR HKALLLNNFP HLSQKCSLSL L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53910.1	3e-46	ERF family protein