PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.236
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 275aa    MW: 31058.4 Da    PI: 9.3383
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.236genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.1e-11102143549
                                   HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHH CS
                           HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAve 49 
                                   +  rE+ RRdr+N++f eL ++l +    +++K++Ka+iL  A +
  evm.model.AsparagusV1_06.236 102 KACREKMRRDRLNDKFLELSSILEPG---KKPKMDKAAILSDAAR 143
                                   678**********************9...9**********99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MPSAFGRKRE RLDFLFLFWV HRGELFREFM ASFENPNWLL ECPLIDELPV SAGDFYWDSQ  60
GFNSSSNASV EIDSSFVDSD GLKESGSRKR TRAITSNEPG SKACREKMRR DRLNDKFLEL  120
SSILEPGKKP KMDKAAILSD AARTVIELRS EAQKLKDSND NLQEKIKELK AEKNELRDEK  180
QKLKAEKENL EQQIKFMNSR PSFLPPPSVI PAAFAAQPKG ASSPATSHKL MMPVIGYPGF  240
PPHQPQAYDA SHRLPRIPNV AVYASYGCRY LSRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-70bHLH family protein