PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.218
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 719aa    MW: 78677.9 Da    PI: 5.5314
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.218genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-2072127156
                                   TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                      Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                                   +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  evm.model.AsparagusV1_06.218  72 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 127
                                   688999***********************************************999 PP
2START225.91.2e-702404556206
                                   HHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S CS
                         START   6 aaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla 77 
                                   +++el+++a+++ep+W+++     + +n +e+ ++f+++ +      ++ea+r++ vv+m++++lve+l+d++ qW++ + 
  evm.model.AsparagusV1_06.218 240 LMEELIRMAQVGEPLWTQDLdnniDALNDEEYFRNFPRGIGpkpfgLESEASRETSVVIMNHVNLVEILMDVN-QWSTVFS 319
                                   689*****************99999*************999********************************.******* PP

                                   ....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EE CS
                         START  78 ....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRael 147
                                       +a tlev+s+g      galq+m+ae+q++splvp R+++fvRy++q+g+g+wv+vdvS+ds ++ p    v R+++
  evm.model.AsparagusV1_06.218 320 givsRAITLEVLSTGvagncnGALQVMSAEFQVPSPLVPtRESLFVRYCKQHGDGTWVVVDVSLDSLRPSP----VLRCRR 396
                                   *********************************************************************98....7***** PP

                                   SSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                         START 148 lpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                                   +pSg+li++++ng+skvtwvehv++++r++h+++++lv+sgla+gak+wv+tl+rqce+
  evm.model.AsparagusV1_06.218 397 RPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKPLVNSGLAFGAKRWVSTLDRQCER 455
                                   *********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    
MNTKDQPNLL EGSQQLPLQH QHSNLLDIAQ ITGESEMVRA AREQEDFESK SGSENIEGAS  60
GDDQDPNQRP KKKRYHRHTQ HQIQEMEAFF KECPHPDDKQ RKELSRELGL EPLQVKFWFQ  120
NKRTQMKTQH ERHENTQLRA ENEKLRAENM RYKDALTNAS CPNCGGPAAL GEMSFDEHHL  180
RLENARLREE IDRISGIAAK YVGKPMVSYP LLSSPMASRS SLDLGVGSGF APPPISGDIL  240
MEELIRMAQV GEPLWTQDLD NNIDALNDEE YFRNFPRGIG PKPFGLESEA SRETSVVIMN  300
HVNLVEILMD VNQWSTVFSG IVSRAITLEV LSTGVAGNCN GALQVMSAEF QVPSPLVPTR  360
ESLFVRYCKQ HGDGTWVVVD VSLDSLRPSP VLRCRRRPSG CLIQEMPNGY SKVTWVEHVE  420
VDDRSVHNIY KPLVNSGLAF GAKRWVSTLD RQCERLASVM ASNIPNGDGG VIQTAEGKKS  480
MLKLAERMVI SFCGGVSAST THQWTTLSGS GAEDVRVMTR KSIDDPGRPP GIVLNAATSF  540
WLPVPPKRVF DFLRDESSRS EWDILSNGGV VQEMAHIANG RDHGNCVSLL RVNSPNSNQS  600
NMLILQESCT DSTGSYVIYA PVDVVAMNVV LNGGDPDYVA LLPSGFAILP DGPTGSVPGG  660
GPISEVGSGG SLLTVAFQIL VDSIPTAKLS LGSVATVNSL IACTVERIKT AVSGEAAQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein