PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.2021
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 283aa    MW: 31444.9 Da    PI: 6.536
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.2021genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.8e-0852821445
                                   HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
                Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwq 45
                                   ++++++G g+W+ Ia+++g +++  qc++++ 
  evm.model.AsparagusV1_06.2021 52 QGIEMYGLGNWAEIAEHVG-TKSKLQCIDHYT 82
                                   6899***************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MPPLQEEGLL FKKGKMDGLP FKGKAEVQYQ QSLNPRILHK LLIYLLSSMW RQGIEMYGLG  60
NWAEIAEHVG TKSKLQCIDH YTTAYMNSPC YPLPDMSRVN GKNRKELLAM AKVQGEGKKG  120
ISMLGDLTPK EESPFSPSRV KIEELSEAPT GRPPSGLTSG ATKKASNNGQ FKVVPDGTKV  180
EGLTSSEDLY VDRSVGVKKP KYSGDEGPSM TELSGYNAKR QEFDPEYDND AEKSLAEMEF  240
KDTDSEAERE LKLRVLHIYL SRQLNPCDMV SGKTLTLNMI LE*