PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1919
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 846aa    MW: 92639.7 Da    PI: 6.6216
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1919genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.52e-172378657
                                   S--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                       Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                    +t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  evm.model.AsparagusV1_06.1919 23 LYTPEQVEALERVYTECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 78
                                   58****************************************************97 PP
2START174.18.8e-551693762204
                                    HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEE CS
                          START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaet 81 
                                    +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W +++++  +
  evm.model.AsparagusV1_06.1919 169 VAEETLTEFLSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRSLNV 247
                                    6899******************************************************.8888888888*********** PP

                                    EEEECTT..EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEE CS
                          START  82 levissg..galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgilie 155
                                    l vi +g  g+++l++++++a+++l++ Rdf+++Ry+  l++g++vi+++S+++ +  p    s+++vRae+lpSg+li+
  evm.model.AsparagusV1_06.1919 248 LTVIPTGngGTVELIYMQTYAPTTLASaRDFWTLRYTTGLEDGSLVICERSLTPSTGGPAgppSPGFVRAEMLPSGYLIR 327
                                    ******************************************************999998889***************** PP

                                    EECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
                          START 156 pksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqc 204
                                    p+++g+s +++v+h dl++++++++lr+l++s  + ++k++ a+l++ +
  evm.model.AsparagusV1_06.1919 328 PCEGGGSMIHIVDHLDLDAWSVPEVLRPLYESPKILAQKMTIAALRHIR 376
                                    ********************************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 846 aa     Download sequence    
MIVQYNHIIV NGTAHSKMFR VRLYTPEQVE ALERVYTECP KPSSIRRQQL IRECPILSNI  60
EPKQIKVWFQ NRRCREKQRK EASRLQTVNR KLTAMNKLLM EENDRLQKQV SHLVYENGYM  120
RQQITTATVA TTDNSCESVV TSGQHHQQQN PTPQHPQRDA NNPAGLLAVA EETLTEFLSK  180
ATGTAVEWVQ MVGMKPGPDS IGIIAVSHNC SGVAARACGL VSLEPTKVAE ILKDRPSWYR  240
DCRSLNVLTV IPTGNGGTVE LIYMQTYAPT TLASARDFWT LRYTTGLEDG SLVICERSLT  300
PSTGGPAGPP SPGFVRAEML PSGYLIRPCE GGGSMIHIVD HLDLDAWSVP EVLRPLYESP  360
KILAQKMTIA ALRHIRQIAQ ESSGEIAYNG GRQPAVLRTF SQRLSKGFND AVNGFTDDGW  420
SLLGSDGVED VTIMINSSPD KLLGSSSIFS PIGGGILCAK ASMLLQNVPP ALLVRFLREH  480
RSEWADCGVD AYSAASLRAS PYAVPGLRAS SGLFGGQVIL PLAHTVEHEE FLEVIRLEGH  540
GLNQDDILMS RDMFLLQLCS GVDDNSVGAC AQLVFAPIDE SFADDAPLLS SGFRVIPLDQ  600
KMDSPAATKT LDLASTLEVG RGVSTRSASD SASNAYNLRS VLTIAFQFTF ENHLRDNVAA  660
MARQYVRSVV ASVQRVAMAI APSQLGTQLG VKHPPGSPEA QTLARWISRS YRSHSGVELF  720
HGDTQAGDSL LKVLWQHSDA IMCCSLKSTP VFTFANQAGL DMLETTLVAL QDITLEKILD  780
DAGRKMLCSE FPKIMQQGFA YLPGGICVSS MGRPVSYEQA VAWKVLNEED THHCLAFMFV  840
NWSFV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein