PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1911
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 301aa    MW: 32585 Da    PI: 9.784
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1911genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.1e-12557148
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqkyl 48
                                   ++rWT+eE+  l  +++++G+g W+tI +          R+  ++k++w++ +
  evm.model.AsparagusV1_06.1911  5 KQRWTAEEESALRAGIAKHGTGKWSTILKDPEfgqilYSRSNVDLKDKWRNIR 57
                                   79****************************9999****************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGNPKQRWTA EEESALRAGI AKHGTGKWST ILKDPEFGQI LYSRSNVDLK DKWRNIRVIS  60
SGRGPRERAT VTMKKNRQTP KSNNTQMVPS SVVRDISDGI LDAMPIAISA GPPPTTTPGK  120
TEANMANLIL EAITNLKEAN GCNITAITMY IEDHYVPRAD LKQLLSGELQ RMTGTGILIK  180
SKHNYRIAPN SNPSEGRSSK SKLLCKGRQR EPSRVNTGAD IKHLNKPQTY SNLAKMVHMS  240
SEEAAAAAVQ AIAEAEAATY KAEEAMRLAE AAEADAEYAQ AVAEQLALAL ENGSSAMSVR  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.15e-55MYB_related family protein