PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1857
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YA
Protein Properties Length: 291aa    MW: 31860.8 Da    PI: 10.0914
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1857genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.49e-32156210358
                      CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                                    p+YVNaKQy++I++RRq+Rak+e  +kl +k rkpylheSRh+hA+rRpRg+gGrF
  evm.model.AsparagusV1_06.1857 156 PIYVNAKQYHGIVRRRQARAKAEMANKL-IKVRKPYLHESRHRHAMRRPRGNGGRF 210
                                    9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MQAAVCFKPH GGSGQLSVPQ QAQASLLPWW IGGQSLYHGE PFTQSKSTAG NCLNGEDQMV  60
GRRPASSDRQ GGDTAKFSMT RDNKDSGGQK TQKSSTTISL PSPFEYQGHF ELGLGQSTAC  120
SNYPFVDQCY GLYATYGAQA MHGRMLLPLN MTADIPIYVN AKQYHGIVRR RQARAKAEMA  180
NKLIKVRKPY LHESRHRHAM RRPRGNGGRF LNSKKDDNSH DGKNTNIKAR EQPPMIISTS  240
PSSEVLHSDS GNLNSASSGS SNNGSEVTSM YFINHFRPSI YMMDGGLLKV *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195204RHRHAMRRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.23e-42NF-YA family protein