PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_06.1813 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 167aa MW: 18846.1 Da PI: 5.4832 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.9 | 1.6e-20 | 52 | 102 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr+++ +g+W+AeIrdp + r +lg+f+taeeAa+a+++a+ +++g evm.model.AsparagusV1_06.1813 52 SEYRGVRRRP-WGKWAAEIRDPL----KaVRKWLGTFDTAEEAARAYDKAAIEFRG 102 569*******.**********73....46************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MDPTVISSFG SNSGCLGCEF FASGELIREV KSSSSSLIEP KIKKRRKKPK TSEYRGVRRR 60 PWGKWAAEIR DPLKAVRKWL GTFDTAEEAA RAYDKAAIEF RGARAKLNFP FPEQEQHQEK 120 ENENEPSDEL KFPTLSEGSS VEKETGEERT TVGLWDGLPD LFEIDF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 40 | 46 | PKIKKRR |
2 | 43 | 47 | KKRRK |
3 | 43 | 48 | KKRRKK |
4 | 43 | 60 | KKRRKKPKTSEYRGVRRR |
5 | 43 | 61 | KKRRKKPKTSEYRGVRRRP |
6 | 44 | 61 | KKRRKKPKTSEYRGVRRR |
7 | 44 | 62 | KKRRKKPKTSEYRGVRRRP |
8 | 45 | 63 | KKRRKKPKTSEYRGVRRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 7e-21 | ERF family protein |