PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.165
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 657aa    MW: 75033.1 Da    PI: 9.4092
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.165genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.86.9e-154289148
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                  +g+WT+ Ed  l+d+v++ G+g+W+++ +  g+ R++k+c++rw ++l
  evm.model.AsparagusV1_06.165 42 KGPWTQSEDRVLADYVRKNGPGNWNAVQKNTGLPRCGKSCRLRWTNHL 89
                                  79******************************99***********996 PP
2Myb_DNA-binding43.19.7e-1495138146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                   +g++ +eE+ ++  +++ lG++ W++Ia++++ gRt++++k++w++
  evm.model.AsparagusV1_06.165  95 KGSFNAEEEAKIHSLHAALGNK-WALIAKELP-GRTDNEIKNYWNT 138
                                   7899******************.*********.***********96 PP
3Myb_DNA-binding50.64.5e-16415462148
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                   r rWT+ Ede+l+d+vk  G ++W++++++ g++R +k+c++rw  +l
  evm.model.AsparagusV1_06.165 415 RRRWTPSEDEILKDYVKNNGERNWNAVPKKTGLNRDGKNCRNRWMRHL 462
                                   78******************************************9886 PP
4Myb_DNA-binding37.36.1e-12468509144
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                                   +g++T eE + +  +++ +G++ W++Ia++++ gRt++++ ++w
  evm.model.AsparagusV1_06.165 468 KGSFTDEESKTIQSLHNSWGNK-WAKIAEELP-GRTDYEIWNHW 509
                                   799*******************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    
MPSLFFFGLM TVFFPTPPPS SGGAGRAREV GGDEGDDHHL RKGPWTQSED RVLADYVRKN  60
GPGNWNAVQK NTGLPRCGKS CRLRWTNHLR PDLKKGSFNA EEEAKIHSLH AALGNKWALI  120
AKELPGRTDN EIKNYWNTKV KREKRRHSPF TPYPELSSST VNYASPHVEF IHQNQSQHSV  180
NLDPAQATFY SDYCYPALQA QQQHGGLQAI VPMQEDYSSC LQLPALEYRN DSPCARVYSP  240
RQPQYPYISN GDVDVVDNEN WVHSYGIPQY PENTLIGMTG SIGAATARRE RTEDYTANAF  300
EEGMPRTPFI NSNLSAQLEQ QAWPQIAATR NNSLTGSNQE QSRLPDRLAW ENKKDSNLAF  360
WIIKEQKKEN KTKKNLQQFF IGSVVIIVFS KTQSAMAAED EAGNNDDGES KFKHRRRWTP  420
SEDEILKDYV KNNGERNWNA VPKKTGLNRD GKNCRNRWMR HLRPNFKKGS FTDEESKTIQ  480
SLHNSWGNKW AKIAEELPGR TDYEIWNHWT LKIRKEQRIR HGVKNTFNSN QQLRHLRNQS  540
RQLPRQNTRD VGYRGSTGFP HAGPPEYDEH TRVLFPLQTE NWQRGTKLTD NADGLLPENA  600
SVARPQEAET STSAPTNPNQ VLSQSAQLDQ REHQMPTTRN NSDTDVTENN PNFQKK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55020.12e-50MYB family protein