PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1604
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family TCP
Protein Properties Length: 331aa    MW: 37255.3 Da    PI: 6.5275
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1604genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1233.4e-381042293132
                            TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssa 82 
                                     ++drhskihT++g+RdRR+Rls+e+a++fF Lqd LGfdk+s t++WL++ +  ai +     +s+  ++       ++
  evm.model.AsparagusV1_06.1604 104 LRTDRHSKIHTAQGLRDRRMRLSLEVARKFFSLQDLLGFDKASATVDWLITHSRSAIEQHLIHLASAT-NV------DAQ 176
                                    589******************************************************98887733333.22......222 PP

                            TCP  83 snsssg...kaaksaakskksqksaasalnlakesrakarararertrekmri 132
                                    +++ ++   k++ s++k+  ++k+ +s + l +esra+arararertrek+r+
  evm.model.AsparagusV1_06.1604 177 DAPVIAysgKKSDSTKKHPLKEKDVSSRSVLTRESRAEARARARERTREKKRM 229
                                    22222233366777778888899999999*********************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MLPYRDPSYL LLDTPFGLKN NDGFPALSSP QLKPPSPAHF LYYDENLMSH ADLFTDNFTP  60
LQLERDQEAN TSKKTTETDT STEPISRKKK GVQAAGEGGK QRSLRTDRHS KIHTAQGLRD  120
RRMRLSLEVA RKFFSLQDLL GFDKASATVD WLITHSRSAI EQHLIHLASA TNVDAQDAPV  180
IAYSGKKSDS TKKHPLKEKD VSSRSVLTRE SRAEARARAR ERTREKKRML VDVDNGDGGN  240
FNSSEDLIYN SIEKDEWPAG EVPQTPDCLQ MAMDGESDKL ANGSYYQYSK DYSMVTKNEE  300
RVNFFNEQLN DGNFSGEFEV YSYNPARPAA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.28e-23TCP family protein