PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.1240

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 448aa MW: 50336.2 Da PI: 7.0715

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.1240	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.1	1.3e-30	81	134	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+ave+LGG+e+AtPk +lelm+v gL++ hvkSHLQ YR+ evm.model.AsparagusV1_06.1240 81 PRLRWTPELHSSFVHAVERLGGQERATPKLVLELMNVRGLSIGHVKSHLQLYRS 134 8****************************************************7 PP
2	Myb_DNA-binding	46.2	1e-14	82	133	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v+av++lGg t+k++ + m+ g++ ++ks++q y+ evm.model.AsparagusV1_06.1240 82 RLRWTPELHSSFVHAVERLGGQeraTPKLVLELMNvRGLSIGHVKSHLQLYR 133 89***********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MGEEKGKEVM KICEDGEEKG SQSLTLDLNE EGEKYHDDDG DDEGNTSSSS TNNNLNCNNK 60 KSGVDEGSAP TVRQYIRSKM PRLRWTPELH SSFVHAVERL GGQERATPKL VLELMNVRGL 120 SIGHVKSHLQ LYRSKKLDDS GQERSAISSA LFSIHNYKGR GDHNYNNVLY GGGVSENRGL 180 FPARSNIHYS DQYYSLLQQS QPIHQPLDFI KNPFRHQELA RICSIKDQGK LSTSHLFSVR 240 DAITGSRNSI SPNGPFHHDQ EMRWQIGSII GKRNGVLDWI DVRSRAFSKN APRNLSVVTG 300 SLRWQERGNY NNNTKIHSSS NDPIVINDAL QHQFEMPFTF ETEFDEILVR RETQPGMKKM 360 RMEEYCKWTP NLNLVLSPPS SMEDGGNVKK CVEADQEVNS VLSLSLSPPN PFSRKSQELL 420 FLEKGSNDKA APGLSTLDLT MSIKALE*

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MGEEKGKEVM KICEDGEEKG SQSLTLDLNE EGEKYHDDDG DDEGNTSSSS TNNNLNCNNK  60
KSGVDEGSAP TVRQYIRSKM PRLRWTPELH SSFVHAVERL GGQERATPKL VLELMNVRGL  120
SIGHVKSHLQ LYRSKKLDDS GQERSAISSA LFSIHNYKGR GDHNYNNVLY GGGVSENRGL  180
FPARSNIHYS DQYYSLLQQS QPIHQPLDFI KNPFRHQELA RICSIKDQGK LSTSHLFSVR  240
DAITGSRNSI SPNGPFHHDQ EMRWQIGSII GKRNGVLDWI DVRSRAFSKN APRNLSVVTG  300
SLRWQERGNY NNNTKIHSSS NDPIVINDAL QHQFEMPFTF ETEFDEILVR RETQPGMKKM  360
RMEEYCKWTP NLNLVLSPPS SMEDGGNVKK CVEADQEVNS VLSLSLSPPN PFSRKSQELL  420
FLEKGSNDKA APGLSTLDLT MSIKALE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-33	G2-like family protein