PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1069
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 302aa    MW: 33247.3 Da    PI: 10.06
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1069genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.54.6e-11555146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                                   +++WT+eE+  l+ +++++G g W+tI +          R+  ++k++w++
  evm.model.AsparagusV1_06.1069  5 KQKWTEEEEFALKAGIRKHGAGKWRTILKDPEfsgilCLRSNVDLKDKWRN 55
                                   79***********************************66**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGAPKQKWTE EEEFALKAGI RKHGAGKWRT ILKDPEFSGI LCLRSNVDLK DKWRNMSVVM  60
NGWGSREKGR IALKKSKQTP RHDENPMALT TGVKDISDEI VEAKPLAMSA GPPQITPPKK  120
SEAKLENLIL EAITNLKEPS GSNKTAIAMY IEDQYVSPPD FKRLLSAKLK KMVEARKLVK  180
VKRKYRIAPS SAFTEGRSSK LMLIEGRPRE ASRVDRDIKQ ISKSQVDAYL ARMRSMTTEE  240
AELAAAEAVA EAEALMTEAE EAAREAEAAE ADFEARKAFA DAATLTLKKG NAAIMWAGSG  300
T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.17e-88MYB_related family protein