PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.1057

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 380aa MW: 41927.9 Da PI: 6.6787

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.1057	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.5e-32	228	283	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG ++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ evm.model.AsparagusV1_06.1057 228 KARRCWSPELHRRFLHALQQLGGCHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 283 68****************************************************97 PP
2	Myb_DNA-binding	43.8	5.8e-14	230	281	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ evm.model.AsparagusV1_06.1057 230 RRCWSPELHRRFLHALQQLGGChvaTPKQIRELMKvDGLTNDEVKSHLQKYR 281 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MSLESCQDSP KFSRSILLGT YATPTLRLNL SGRDESKSSI LSPCNVLTSA SLDSVVAMDY 60 IKALEKEREK ILVFERELPL SLLLVTQAIE SCKKPEVGGS EEISSEGPIL EEFIPLRPSC 120 SSSDEENNNN HGNGWIGDGF DKKPDWLRSV QLWNPQAEPP KGDIVRRPVA VNARKIGGAF 180 HPFEKEKVGV KAPAAAPASS TTENTNEGGR GNGGSMEEKE KEGHSQRKAR RCWSPELHRR 240 FLHALQQLGG CHVATPKQIR ELMKVDGLTN DEVKSHLQKY RLHIKRPTTP TVHNNSNSNA 300 QQPQIVLVGS LWMPPPNYTT EAESTPSNEI YTPVASLPFE FDLRKRDTSP ERDDNVEDSE 360 RPKSHSSNTS SQTTTASLP*

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MSLESCQDSP KFSRSILLGT YATPTLRLNL SGRDESKSSI LSPCNVLTSA SLDSVVAMDY  60
IKALEKEREK ILVFERELPL SLLLVTQAIE SCKKPEVGGS EEISSEGPIL EEFIPLRPSC  120
SSSDEENNNN HGNGWIGDGF DKKPDWLRSV QLWNPQAEPP KGDIVRRPVA VNARKIGGAF  180
HPFEKEKVGV KAPAAAPASS TTENTNEGGR GNGGSMEEKE KEGHSQRKAR RCWSPELHRR  240
FLHALQQLGG CHVATPKQIR ELMKVDGLTN DEVKSHLQKY RLHIKRPTTP TVHNNSNSNA  300
QQPQIVLVGS LWMPPPNYTT EAESTPSNEI YTPVASLPFE FDLRKRDTSP ERDDNVEDSE  360
RPKSHSSNTS SQTTTASLP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-73	G2-like family protein