PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.989
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family DBB
Protein Properties Length: 316aa    MW: 34149.1 Da    PI: 4.4851
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.989genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.42.5e-07447542
                      zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                                   C+ +e  e++  C  ++  lC  C ++ H+       H++vpl
  evm.model.AsparagusV1_05.989  4 QCNACEAAEATVMCCADEAALCSACDEKVHRAnklagkHQRVPL 47
                                  7******99*********************7799999**99986 PP
2zf-B_box28.92.4e-095696337
                      zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                                   +kC+ ++e    +fC +++ l+C++C +++H        H
  evm.model.AsparagusV1_05.989 56 LPKCDICQEASGYFFCLEDRALFCRNCDVSIHTAnsyvsaH 96
                                  689*****************************554555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MKIQCNACEA AEATVMCCAD EAALCSACDE KVHRANKLAG KHQRVPLVAA SSPSGLPKCD  60
ICQEASGYFF CLEDRALFCR NCDVSIHTAN SYVSAHRRFL VTGVQVGLEP ADPLPSFPKE  120
QASSSGRVSE RPTKLLPEGN SSMLFAGEAN QVFSNQASKG GYVPTAKTSY SGVNMVGGLP  180
DWSVDDFFGF INFNQNYGYP ENSSSKADSG KLGSSDDSPP YFPADERINF DECLGQVPEI  240
SYNTVPEIPS PPTASGFHLQ RNLLYPPSEH AVFVPDICSS HNRYGYQVIG CIADEDDAHE  300
TIMLGLFWDL DAENL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.12e-80DBB family protein