PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.751
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 242aa    MW: 26798.8 Da    PI: 6.3149
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.751genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.84.7e-1997186198
                                   EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                            B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                                   f+k +++s+v+   +l lp kf++e+ +++e    ++lede+g++ +v +   +++++  l++GW++F+ +++L++ D++v
  evm.model.AsparagusV1_05.751  97 FIKPMVRSHVSGGFWLGLPTKFCKENFSPNEL--RVILEDEKGKEHDVLY--LGRKNG--LSGGWRGFAIDHNLEDEDVLV 171
                                   89************************877555..7***************..555555..9******************** PP

                                   EEE-SSSEE..EEEEE- CS
                            B3  82 Fkldgrsefelvvkvfr 98 
                                   F+l++ ++f  +v++++
  evm.model.AsparagusV1_05.751 172 FELSEPTRF--KVRIIK 186
                                   **9765666..888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MLSLMHMWHD ENIVTAGHGY EEYAESLMLE SCAVQMISLA GPNAVIGRAF VVHELEDDLG  60
KGELCVPMFL FSEDQKIVAL KRAEELQRDL TSHYPSFIKP MVRSHVSGGF WLGLPTKFCK  120
ENFSPNELRV ILEDEKGKEH DVLYLGRKNG LSGGWRGFAI DHNLEDEDVL VFELSEPTRF  180
KVRIIKAIEG ESPKTDKLAD CAAALSKTKG SSGTKEEIQA VSKKRSLKTG SAKEALKATK  240
C*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.13e-40B3 family protein