PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.65 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 218aa MW: 24851.7 Da PI: 8.5896 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.3 | 2.9e-13 | 51 | 103 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +r hne Er RR+++Ns +++Lr llP+ + skKls + ++ +YI +Lq evm.model.AsparagusV1_05.65 51 KRSIHNEYERDRRKKLNSLYSTLRNLLPEtD---ESKKLSIPCTIARVLKYIPELQ 103 7999*************************77...*******************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MSSFSPNSSN FGWQLEDILI NELRSDELFA HYSPNDQDTS KTSITASNSM KRSIHNEYER 60 DRRKKLNSLY STLRNLLPET DESKKLSIPC TIARVLKYIP ELQKNIKRMA GKKEEILLSM 120 SKRQNFVIEP TISAKCLNKK EVIMQICIKN RSEMIPLSNI VKILEGEGLE LMNASTIANY 180 ADGIFYSLHL QAKDIIWMDG ESYCVHLINV LKEASKS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 3e-34 | bHLH family protein |