PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.477
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 308aa    MW: 34230.3 Da    PI: 8.5875
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.477genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.6e-20102152155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa+a+++a+k+++g
  evm.model.AsparagusV1_05.477 102 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTALEAARAYDEAAKAMYG 152
                                   56*****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MAALLSGLGV NGRLLQGCRG AVGVRWQSRG RRRLLGRRER KKRPRRRSDG PDSLAETLAK  60
WKELNRQNDT SKDGRKPTQK VPAKGSRKGC MRGKGGPENS HCNYRGVRQR TWGKWVAEIR  120
EPNRGSRLWL GTFPTALEAA RAYDEAAKAM YGSLARLNFP DRKEASTATT TSESCGSTTT  180
SHPSVSSGGE DHEQLTSPKP EPKDDPNGEK LFGNLDHIQD LPEEMFDVED MLRMMDADPN  240
NMGQPEGGTA GLEWQYDGPL AYANVGLMEP DPYGVDYRYN VIRPMRQDVD FAPLIDQEVF  300
DPEFGGF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12942RGRRRLLGRRERKK
23144RRRLLGRRERKKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.13e-36ERF family protein