PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.3507 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 205aa MW: 23461.5 Da PI: 8.1209 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.4 | 6e-19 | 80 | 132 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++++eq++ Le+ F+++++++ +++eLA+kl+L rq+ vWFqNrRa+ k evm.model.AsparagusV1_05.3507 80 KLRLSPEQVTLLEDTFREHNTLNGFQKQELAEKLNLRPRQIEVWFQNRRARNK 132 56789**********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 114.1 | 8.4e-37 | 78 | 169 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerL 80 +kk+rls eqv+lLE++F+e+++L+ +K+ela++L+l+prq++vWFqnrRAR k+kq+E+d++ Lk+++++l+een+rL evm.model.AsparagusV1_05.3507 78 NKKLRLSPEQVTLLEDTFREHNTLNGFQKQELAEKLNLRPRQIEVWFQNRRARNKLKQMEVDFQLLKKWCETLNEENRRL 157 59****************************************************************************** PP HD-ZIP_I/II 81 ekeveeLreelk 92 +ke +eL+ ++k evm.model.AsparagusV1_05.3507 158 KKELQELKLRVK 169 *******98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MEGGHDHIEE SKIGLGLAIG SHENYPISHD HKLHILFPPK KEGEGEEKDR QRKRSQSMDR 60 DDDESIAKEN RSGGGGGNKK LRLSPEQVTL LEDTFREHNT LNGFQKQELA EKLNLRPRQI 120 EVWFQNRRAR NKLKQMEVDF QLLKKWCETL NEENRRLKKE LQELKLRVKQ PEGSVLHLDL 180 PPKVDPGAPT CKKCTSGDSS IANE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 49 | 54 | DRQRKR |
2 | 127 | 135 | RRARNKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 8e-30 | HD-ZIP family protein |