PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.345
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 304aa    MW: 35533.7 Da    PI: 10.1546
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.345genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.34.8e-15453148
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48
                                  r+rW+teEd ll  +vk++G++ W++++++m+   +R +k+c +rw +yl
  evm.model.AsparagusV1_05.345  4 RQRWSTEEDALLRSYVKRYGPREWSLVSQRMNvpFHRDAKSCLERWKNYL 53
                                  89********************************99************97 PP
2Myb_DNA-binding37.65e-1259103147
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                   +g+ T+eE++l +++ +++G++ Wk+Ia++++ gRt+k +  +w  +
  evm.model.AsparagusV1_05.345  59 KGSLTKEEQLLVIQLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103
                                   6788******************.*********.*****999999766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MKERQRWSTE EDALLRSYVK RYGPREWSLV SQRMNVPFHR DAKSCLERWK NYLAPSIKKG  60
SLTKEEQLLV IQLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRL KQNSTKGAIT  120
NFIEPRKYDR ILENFAEKLV KERYDAQFLM PTPIFPPWLS KPGSPSVTLS LSPSPNLVDN  180
RQNISSGSPN SIVYELSECC RELDEGYQAL ASHRKESSWR LKRVELQLES EKASKRKEKV  240
EETEARIRAL REEEVVALDR IDAEYKEQIS SLRRDAEAKE MKLAEQWAAM NARLSKFLEQ  300
MQH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.11e-117MYB family protein