PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.3371 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 177aa MW: 19479.1 Da PI: 8.4778 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.1 | 9.9e-30 | 25 | 84 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y+rC++a Cpvkkkv+rsaed ++++ tYegeH+h+ evm.model.AsparagusV1_05.3371 25 VKDGYQWRKYGQKVTRDNPCPRAYFRCSFApACPVKKKVQRSAEDRRLLVATYEGEHTHS 84 58***************************99****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MREEARPKIS KLCVYTDPSD PSLVVKDGYQ WRKYGQKVTR DNPCPRAYFR CSFAPACPVK 60 KKVQRSAEDR RLLVATYEGE HTHSQPLSVE PPAGGSLTPS PVKVQTSSPT VTLDLTRPNP 120 SLSPDRSSME TESPDEFQRR LAEQMVTTLT NDPGFTLALA SAISGKFLGL TPDHCQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31800.1 | 1e-52 | WRKY family protein |