PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.3360 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ARR-B | ||||||||
Protein Properties | Length: 652aa MW: 71299.8 Da PI: 5.9108 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.4 | 3.3e-28 | 208 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ +LH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl evm.model.AsparagusV1_05.3360 208 KPRVVWSVDLHRKFVAAVNQL-GIDKAVPKRILDLMNVEKLTRENVASHLQKYRL 261 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 36.3 | 1.3e-11 | 210 | 260 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ +++ ++v av+qlG + +k+I m+ +++t++++ s++qky+ evm.model.AsparagusV1_05.3360 210 RVVWSVDLHRKFVAAVNQLGIDkaVPKRILDLMNvEKLTRENVASHLQKYR 260 678********************************99*************7 PP | |||||||
3 | Response_reg | 76.5 | 9.9e-26 | 19 | 127 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt 78 vl vdD+p+ +++l+++l + +y +v+++ ++ +ale+l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++ evm.model.AsparagusV1_05.3360 19 VLAVDDDPTCLKVLESLLLRCQY-HVTTTNQAIKALEMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLS 96 799********************.***************888889*******************87754.558******* PP STTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 79 ahgeeedalealkaGakdflsKpfdpeelvk 109 a+ge + + + + Ga d+l Kp+ +eel + evm.model.AsparagusV1_05.3360 97 ANGETQAVMKGITHGACDYLLKPVRIEELKN 127 ****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 652 aa Download sequence |
MTVVERSGSR DRFPIGMRVL AVDDDPTCLK VLESLLLRCQ YHVTTTNQAI KALEMLRENK 60 DQFDLVISDV HMPDMDGFKL LELVGLEMDL PVIMLSANGE TQAVMKGITH GACDYLLKPV 120 RIEELKNIWQ HVIRRKKVDP RDNNNLDSGD DCDKNQLMNS EGGQGSLANG SSDQNRKLNR 180 KRKDQNEEDD DDSEDNLNEN EDSSTQKKPR VVWSVDLHRK FVAAVNQLGI DKAVPKRILD 240 LMNVEKLTRE NVASHLQKYR LYLKRLSAVA NQQANMVAAL RGRDTSYLPL GSLNGYPNFN 300 SLVESRPLPN RSSFQPNGAV PRMNSFNGFG LHGFSLNNTN NPINDVSKLQ CIGPIVQQPK 360 AMQESSNSLL GGFSGSGVAI GHSNSFTNSA AKIPHIPSPL SSDPFEIGIG DSSHSADLSR 420 CNESWQGAIP STSYSGNTFA TSLPFSHNDL SSGNIRENLS PIVSNLGSNA RDSMMQNDRL 480 ANVHNQAGTL VTATGVNGDA NLLNFRSVGN SSLKWEDPRR GHIQNPNQIY SSLSNTSSSG 540 IRITDQNKGN QNLGNGFSND KIDVPIISQA NFRAPMLPLD SKSDKTAVGG QLHYKDEPLF 600 EGMKLPGGFN SGGFGLDDLV TNAMIKPECD DFTFIDGDIG CNDLYSLGAC M* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-116 | ARR-B family protein |