PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.336 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 613aa MW: 67772.5 Da PI: 10.0887 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.6 | 1.2e-07 | 520 | 569 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ evm.model.AsparagusV1_05.336 520 RRPFSVAEVEALVQAVEKLGTGRWRDVKIRAFdnaKHRTYVDLKDKWKTL 569 6789999*******************9999989**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 613 aa Download sequence |
MVLHKRLDYG SIGYQVPPMP RVPRSAKGKR SIRKKLDNKQ ISAFDLLATV AGELLSEREN 60 SLPQCKISGT VNPTIKQEQQ ENEMPFKAEV FDQGSCNEST LGSESAFKRQ ISCKLEKPSQ 120 TLKSLEGKKG ELSSIAMKCD IDGKVEIGQS GPGILEDPMD LDAKPPALVS SDSSVKVPIS 180 RSSSFSKSRD KNELVDGDGD ENSSWCTHPC TDAAKAFRLQ RIGDRRIRKL LASKIWKVPP 240 KVLKDGELSN NDVQMKTVFG SKKMCYTRQR TQRSPFKRRK LFEHRPISVA VGGIYGEGIP 300 KSAKFGGLQI ERNDGHAISK SSYDSGDYHV KFTIKSFKVP ELFIEIPETA TVGSLKRTVM 360 EAVTAVLAGG LRVGVLLQGK KVRDDKQTLL QAGISHKDKM DNLGFSLEPN STQAPPPPLI 420 SPEDPNPLLL SNPIQRISAP VPVIDQMLPE TLPEQPQTST LNSPESDHDS GHSHTEASSS 480 VDKNASLKAL VPVPDMNSDS LAVIPSRKPK QTELVQRRIR RPFSVAEVEA LVQAVEKLGT 540 GRWRDVKIRA FDNAKHRTYV DLKDKWKTLV HTARISPQQR RGEPVPQELL DRVLLAHSYW 600 AQQQAKLQSK PN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 224 | 230 | DRRIRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07540.1 | 1e-102 | MYB_related family protein |