PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.336
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 613aa    MW: 67772.5 Da    PI: 10.0887
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.336genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.61.2e-07520569147
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                                   r +++  E e lv+av++lG+g+W+ +  +     k+Rt  ++k++w ++
  evm.model.AsparagusV1_05.336 520 RRPFSVAEVEALVQAVEKLGTGRWRDVKIRAFdnaKHRTYVDLKDKWKTL 569
                                   6789999*******************9999989**************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    
MVLHKRLDYG SIGYQVPPMP RVPRSAKGKR SIRKKLDNKQ ISAFDLLATV AGELLSEREN  60
SLPQCKISGT VNPTIKQEQQ ENEMPFKAEV FDQGSCNEST LGSESAFKRQ ISCKLEKPSQ  120
TLKSLEGKKG ELSSIAMKCD IDGKVEIGQS GPGILEDPMD LDAKPPALVS SDSSVKVPIS  180
RSSSFSKSRD KNELVDGDGD ENSSWCTHPC TDAAKAFRLQ RIGDRRIRKL LASKIWKVPP  240
KVLKDGELSN NDVQMKTVFG SKKMCYTRQR TQRSPFKRRK LFEHRPISVA VGGIYGEGIP  300
KSAKFGGLQI ERNDGHAISK SSYDSGDYHV KFTIKSFKVP ELFIEIPETA TVGSLKRTVM  360
EAVTAVLAGG LRVGVLLQGK KVRDDKQTLL QAGISHKDKM DNLGFSLEPN STQAPPPPLI  420
SPEDPNPLLL SNPIQRISAP VPVIDQMLPE TLPEQPQTST LNSPESDHDS GHSHTEASSS  480
VDKNASLKAL VPVPDMNSDS LAVIPSRKPK QTELVQRRIR RPFSVAEVEA LVQAVEKLGT  540
GRWRDVKIRA FDNAKHRTYV DLKDKWKTLV HTARISPQQR RGEPVPQELL DRVLLAHSYW  600
AQQQAKLQSK PN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224230DRRIRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.11e-102MYB_related family protein