PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.3318

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 197aa MW: 22579.3 Da PI: 7.1465

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.3318	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.5	4.5e-08	145	178	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + evm.model.AsparagusV1_05.3318 145 KWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 178 469*****************************87 PP
2	ELK	30.2	1e-10	99	120	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ evm.model.AsparagusV1_05.3318 99 ELKHELKQGYKEKIVDIREEIL 120 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MTHYVLLLCS FKEQLQQHVR VHAMEAVMAC WELEQSLQSL TGVSPGEGTG ATMSDDDDDQ 60 ADSETNFYDG GFDGPDNMGF GPLVPTESER SLMERVRQEL KHELKQGYKE KIVDIREEIL 120 RKRRAGKLPG DTTSTLKAWW QSHSKWPYPT EDDKARLVQE TGLQLKQINN WFINQRKRNW 180 HSNPSSSTAL KSKRKR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	196	RKRNWHSNPSSSTALKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-127	TALE family protein