PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.324
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 301aa    MW: 34275.8 Da    PI: 4.9582
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.324genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.88.2e-32104160258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                                   dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers+edp+++++tYeg H h
  evm.model.AsparagusV1_05.324 104 DDGYKWRKYGQKTIKNSPNPRSYYRCTNSRCHAKKQVERSTEDPETLIVTYEGLHLH 160
                                   8******************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MEETDEAESY WLHELEDELS KDLDVSETVA PQESTIRNKL IANIYSGPTI NDIENALASS  60
YQSRSGVEGI NKMHPVMSAS EKGYGKIENK YTIRIKSSGN GLADDGYKWR KYGQKTIKNS  120
PNPRSYYRCT NSRCHAKKQV ERSTEDPETL IVTYEGLHLH YTYSHFLLPR PQNSLHMPKK  180
PKIQNPSSED KHNEELKAQS PETRTEQEEQ KQSRVIGEDK PQEDFRKDLE TTYLSIIEEQ  240
NSKGLLEDIV PFFVRNPSSS TTSSIEPSSP SQVSSPSYSS SLSWSPIDFY FDEDILSYII  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.13e-50WRKY family protein