PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.3124

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

SBP

Protein Properties

Length: 810aa MW: 90681 Da PI: 8.5455

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.3124	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.9	9.5e-41	130	207	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCevhsk++++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+++ evm.model.AsparagusV1_05.3124 130 MCQVDDCKTDLSSAKDYHRRHKVCEVHSKMTKALVGNQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTHP 207 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 810 aa Download sequence
MEGEISTQIA PPIVMQQSLP SLFRESPPVH RKRDVACQNA NLLPTSTANW NPNLFSWDSV 60 SFSVRQSSNE VQISQDSIMK KSFEEGGENL SLKLGGGGAL VVKEDQAAVR PSKKVRSGSP 120 GNTGGGNYPM CQVDDCKTDL SSAKDYHRRH KVCEVHSKMT KALVGNQMQR FCQQCSRFHL 180 LSEFDEGKRS CRRRLAGHNR RRRKTHPEEA STQLSHVNQG SSDTNNLDIV KLLTIFARMQ 240 GNGAGGAKVA GAHQIPDKDQ VNHILGRIHS LRAANSASRS PSSSNSDGQD RTGRIIFKLF 300 DKDPSSFPGA LRAQILSWLS NSPSEMESYI RPGCVVLSIY ASMPSTAWHE IESNLCQRVS 360 SLVQCSESEF WRSGRFLVRT NRQLASHKDG KIHLCKSWKT WRAPELTYVS PIAVVSGQET 420 SFVLKGWNLT APGTRIHCTY MGGYTSKEVL GSVYQDTIYK GSSTECFSFH CESGDVFGRC 480 FIEVENGLKG NSFPVIIADA TVCKELRLLE SDFDAERTTD SISHDQVGPR SREDVLHFLN 540 ELGWLFQRKN TPLDLFLTNF SPKRFNFLLT FSVERDWPAV VKTLLDMLVE RSLVSQDSLV 600 QESLEMLLEI QLLNRAVKRK CRKMVDLLLH YSVKGSDNDT KMYLFRPNSA GPGGITPLHL 660 AASMQDSEDM VNALTDDPQE IGLNCWDSIL DESGQSPYMY ASARNKHSYN ELVARKLADK 720 KSGQISISLE DHHLSFRITT MRSCAQCARL DAHRFKRRHR NGGFLHRPYI HSMLAIATVC 780 VCVCLLMRGL PKLDNIAPFM WENLEYGPQ*

Sequence ? help Back to Top

Protein Sequence Length: 810 aa Download sequence

MEGEISTQIA PPIVMQQSLP SLFRESPPVH RKRDVACQNA NLLPTSTANW NPNLFSWDSV  60
SFSVRQSSNE VQISQDSIMK KSFEEGGENL SLKLGGGGAL VVKEDQAAVR PSKKVRSGSP  120
GNTGGGNYPM CQVDDCKTDL SSAKDYHRRH KVCEVHSKMT KALVGNQMQR FCQQCSRFHL  180
LSEFDEGKRS CRRRLAGHNR RRRKTHPEEA STQLSHVNQG SSDTNNLDIV KLLTIFARMQ  240
GNGAGGAKVA GAHQIPDKDQ VNHILGRIHS LRAANSASRS PSSSNSDGQD RTGRIIFKLF  300
DKDPSSFPGA LRAQILSWLS NSPSEMESYI RPGCVVLSIY ASMPSTAWHE IESNLCQRVS  360
SLVQCSESEF WRSGRFLVRT NRQLASHKDG KIHLCKSWKT WRAPELTYVS PIAVVSGQET  420
SFVLKGWNLT APGTRIHCTY MGGYTSKEVL GSVYQDTIYK GSSTECFSFH CESGDVFGRC  480
FIEVENGLKG NSFPVIIADA TVCKELRLLE SDFDAERTTD SISHDQVGPR SREDVLHFLN  540
ELGWLFQRKN TPLDLFLTNF SPKRFNFLLT FSVERDWPAV VKTLLDMLVE RSLVSQDSLV  600
QESLEMLLEI QLLNRAVKRK CRKMVDLLLH YSVKGSDNDT KMYLFRPNSA GPGGITPLHL  660
AASMQDSEDM VNALTDDPQE IGLNCWDSIL DESGQSPYMY ASARNKHSYN ELVARKLADK  720
KSGQISISLE DHHLSFRITT MRSCAQCARL DAHRFKRRHR NGGFLHRPYI HSMLAIATVC  780
VCVCLLMRGL PKLDNIAPFM WENLEYGPQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	1e-177	SBP family protein