PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2926
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 225aa    MW: 24377.5 Da    PI: 10.1155
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2926genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.61.4e-13106150347
                                    SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                    +WT+eE+  ++ + ++lG+g+W+ I+r + + Rt+ q+ s+ qky
  evm.model.AsparagusV1_05.2926 106 PWTQEEHRAFLVGLEKLGKGDWRGISRNFVTSRTPTQVASHAQKY 150
                                    8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MGRKCSHCGN NGHNSRTCNS QKGILGGGGG VRLFGVQIYI GSSPMKKSFS MDCLSSSYNY  60
NTSSSPSSSS SSSSLLCIEE TPEKISSGYL SDGLIGRAQE RKKGVPWTQE EHRAFLVGLE  120
KLGKGDWRGI SRNFVTSRTP TQVASHAQKY FLRQNSINKK KRRSSLFDVG SKIDLNSSLE  180
QEKCVNLMPS SSPLPDLELS MSSRPMHPST TGSSSLLVET IRVT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159163KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-52MYB_related family protein