PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.2876 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 27988.4 Da PI: 7.4379 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 117 | 168 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd + k r++lg+f+taeeAa a+++a++k++g+ evm.model.AsparagusV1_05.2876 117 QYRGVRRRP-WGKYAAEIRDtSR---KGVRVWLGTFDTAEEAALAYDKAALKMRGP 168 69*******.**********331...34**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MAAQASQKLL ENVWANFIYD TKKSCNSSEE FNKIPAGSQT WQEPPNPEAD RNMEVLQRLP 60 SLGRWISMGA DCWEGLLDGL IDSTGLQTSS NLSTGSTVCS AAESKPPSKE KKVATRQYRG 120 VRRRPWGKYA AEIRDTSRKG VRVWLGTFDT AEEAALAYDK AALKMRGPRA HLNFSMDMVV 180 KALESNETNH DRRKRAKREW NTNDGNLIES PPRKRMASIA PDHSQEMEVV EFYDLGDDYL 240 ESFMSSFV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 192 | 199 | RRKRAKRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 5e-28 | ERF family protein |