PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.2784 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 252aa MW: 27747.5 Da PI: 10.8066 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.7 | 2.7e-13 | 92 | 136 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky evm.model.AsparagusV1_05.2784 92 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVVSRTPTQVASHAQKY 136 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MRSRHRVSTK SGRRGGEETF RRCCGGLEAM RLGKVRRLPR YLGEEVKEKE KEQSNGGQQS 60 QQYQSHGGFG ERRGFEGKAC SKAEQERRKG IPWTEEEHRL FLLGLDKFGK GDWRSISRNF 120 VVSRTPTQVA SHAQKYFIRL NSMNKDRRRS SIHDITMVNG GDVASPQGPI TGQSNGNPPA 180 LAASSSMKHP SQHPQHPPAM PGVGMYGPPM GHPVTGHMVS AVGTPVMLPP HGHPPYVMPV 240 AYPVPPSSMH Q* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 5e-43 | MYB family protein |