PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2588
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 279aa    MW: 31477.2 Da    PI: 6.5147
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2588genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.5e-161462148
                                   TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                                   +g+W++eEd +l+ ++++ G+g +W + ++++g++R++k+c++rw++yl
  evm.model.AsparagusV1_05.2588 14 KGPWSPEEDAKLKAYIEENGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62
                                   79*********************************************97 PP

2Myb_DNA-binding39.31.5e-1269111246
                                    SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
                Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                    g +++eEd+++  +    G++ W+ Ia+ ++ gRt++++k++w++
  evm.model.AsparagusV1_05.2588  69 GGFSEEEDQIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                                    569******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE ENGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDQIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR  120
RKDPSQSRRS FSLNQELSSH ADKPSQTLSS TALERMQLHL QLQGLNNPFS FYNNPALWPK  180
FNPLGSQPVY NPTSEQNEQS LIPSMPSDEP SYPPLSAGTQ EDFSCESSSN FNSLNDELQN  240
LIYGNNGIAE LEKENVNWFG NEFDSLMLQE NHVLGYDM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.11e-93MYB family protein