PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.2516

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 479aa MW: 52710.9 Da PI: 6.2375

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.2516	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87	1.9e-27	145	198	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+ Wt++LH++F++a+++L G ++A+Pk+il+lm+ +gLt+e+v+SHLQkYR evm.model.AsparagusV1_05.2516 145 KPRVAWTSDLHSKFIDAINKL-GLDRAVPKKILDLMNTPGLTRENVASHLQKYRK 198 79*****************.******************************6 PP
2	Myb_DNA-binding	41.2	4e-13	147	197	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r +WT +++ +++da+++lG + +k+I m+ g+t++++ s++qky+ evm.model.AsparagusV1_05.2516 147 RVAWTSDLHSKFIDAINKLGLDraVPKKILDLMNtPGLTRENVASHLQKYR 197 679***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MGETEGGSLE KSTEDEFCPK EIRVLAVDDD AVCLKMLERL LLKCGYQVLS VDSEVKTVMK 60 GIKHGACDYL VKPVRIEELQ LIWKHVMKKS LLDAKVSNDD ANKPEKISKS EEDNTSRSRA 120 KCQSKYKEVI DNDEDSDEDL ATQKKPRVAW TSDLHSKFID AINKLGLDRA VPKKILDLMN 180 TPGLTRENVA SHLQKYRKAL KKNSITVTQH YYSNIASSGS RANTGNPVLS SFINQVSNVN 240 ALGGFQVQAS QNNQRPIPFA NVQQSHIGHS PISATWSRFP VNNQNNIPQS YSSTPQASQL 300 RFNHFGSASN PLVMQTDTPR LASKPRIYQS LIPRLNQPSS FMENLSRIHG LNETISSPSS 360 INQPGFVPSE HGFDSIVDQS SEHGGLKDAF AAGLDALVQD HQDQPNQFSA QIGSDFGFGI 420 GINVNSMVPE SSGHKQPEGV NPLEDHLAPY MDSSLDETPF HLSNSDSADD LQSVLNQV*

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MGETEGGSLE KSTEDEFCPK EIRVLAVDDD AVCLKMLERL LLKCGYQVLS VDSEVKTVMK  60
GIKHGACDYL VKPVRIEELQ LIWKHVMKKS LLDAKVSNDD ANKPEKISKS EEDNTSRSRA  120
KCQSKYKEVI DNDEDSDEDL ATQKKPRVAW TSDLHSKFID AINKLGLDRA VPKKILDLMN  180
TPGLTRENVA SHLQKYRKAL KKNSITVTQH YYSNIASSGS RANTGNPVLS SFINQVSNVN  240
ALGGFQVQAS QNNQRPIPFA NVQQSHIGHS PISATWSRFP VNNQNNIPQS YSSTPQASQL  300
RFNHFGSASN PLVMQTDTPR LASKPRIYQS LIPRLNQPSS FMENLSRIHG LNETISSPSS  360
INQPGFVPSE HGFDSIVDQS SEHGGLKDAF AAGLDALVQD HQDQPNQFSA QIGSDFGFGI  420
GINVNSMVPE SSGHKQPEGV NPLEDHLAPY MDSSLDETPF HLSNSDSADD LQSVLNQV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-47	ARR-B family protein