PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2184
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family CO-like
Protein Properties Length: 418aa    MW: 45283.9 Da    PI: 4.8464
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2184genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box19.52.1e-06444539
                       zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                                    C+ ++e++   +C+++   lC +C  + H+       H++
  evm.model.AsparagusV1_05.2184  4 LCDYCGEQRSMVYCRSDAASLCLSCDRNVHSAnalsrrHSR 44
                                   7*****************************65677777776 PP
2zf-B_box25.42.8e-084689441
                       zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                                    +C+++ +++++  C d ++ lC++C  ++H+g      H++++
  evm.model.AsparagusV1_05.2184 46 LICDRCVSQPAIVRCVDENVSLCHNCDWNGHSGlasaseHKRQT 89
                                   68*****************************8899999999876 PP
3CCT65.71.3e-22360403144
                            CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                                    R+ a++RYkeK+k+RkF+KkirY+sRKa+A+ R RvKGrFvk+ 
  evm.model.AsparagusV1_05.2184 360 RDSAVMRYKEKKKNRKFDKKIRYASRKARADIRRRVKGRFVKAG 403
                                    899**************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MGSLCDYCGE QRSMVYCRSD AASLCLSCDR NVHSANALSR RHSRTLICDR CVSQPAIVRC  60
VDENVSLCHN CDWNGHSGLA SASEHKRQTI NCYSGCPSAA ELSRIWSFVT EFPPVDDSTC  120
EEGIGLMSIN ENCVSTCWGE PGSSSKQDVT MNELDNTDKF NPWIGSSSAS ALNPPPSSAQ  180
PGGSAESTTP KLCDSEIKDQ DIRKGGFYED FTVDDVELTF QNYEELFGGS HDQSGPLFDD  240
AGIDSFFDLK EMSGTNSNCQ GEYVAEESSA ELGKSIQPAC SNAVSADSLM SNPGTKADPG  300
ASFPARKAHS SLSLSFSGLT GESSAGDYPE MSSMLLTGEP PWCPSNPTGP EASSFSAANR  360
DSAVMRYKEK KKNRKFDKKI RYASRKARAD IRRRVKGRFV KAGDAYDYDP LCQTRSY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07650.21e-106CO-like family protein