PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.2141 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 274aa MW: 30367.5 Da PI: 6.4392 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106 | 2.1e-33 | 18 | 72 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrW+++LHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl evm.model.AsparagusV1_05.2141 18 RQRLRWSNDLHERFVDAVAQLGGPDRATPKGVLKVMGVPGLTIYHVKSHLQKYRL 72 58****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 59.4 | 7.8e-19 | 20 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rW+ +++e++vdav+qlGg+ t+k + + mg g+t +++ks++qky+ evm.model.AsparagusV1_05.2141 20 RLRWSNDLHERFVDAVAQLGGPdraTPKGVLKVMGvPGLTIYHVKSHLQKYR 71 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MGINSEGNNS DNPGTSSRQR LRWSNDLHER FVDAVAQLGG PDRATPKGVL KVMGVPGLTI 60 YHVKSHLQKY RLSKYLPDST SDGSNVEKGE QEGQLSTIDN SSGMQITEAL KLQMEVQKRL 120 HEQLEVQRQL QLRIEAQGKY LKKIIEEQQK VNGDGNIPTP IPTNICHDSD KTYPSTPAPT 180 SEEKPTRDDH GLYNGHLHNE SVASQHEPLT PDSSGRDDSP FRSPQNEYPN KKQRSENFVL 240 SHQILESSSS SGFQQPGLMF PVVGSHFDSP FGN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 6e-75 | G2-like family protein |