PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2067
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family Nin-like
Protein Properties Length: 286aa    MW: 33350.6 Da    PI: 4.6266
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2067genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.91.6e-26161209452
                         RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                                    ei l+++++yF++pi+ AAke++v++T+LK++CR++GI RWPhRk+ksl
  evm.model.AsparagusV1_05.2067 161 EIGLDEIKSYFYMPITRAAKEMNVGVTLLKKRCRELGILRWPHRKMKSL 209
                                    7999*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MELVQSTSNV MSIDDPSLFD CFEFEDQLNT IPPLQFSEVD AFVPFPTSFD DHWMDISNLS  60
SNNFDATKSL LPLVPENYYR DLPPLNELSF DYEINLDSFS WDDNLSIPRN PGSVPLNTVD  120
DDSILSFPFE AKKNLDYDDI NEDEHDVKIE RRINGRLKLG EIGLDEIKSY FYMPITRAAK  180
EMNVGVTLLK KRCRELGILR WPHRKMKSLN TLIRNVQELG KGSNEECIKR ELESLEEHRR  240
LMEENPELEL TERTKKLRQA CFKANYKRRR AMQHPYFDPL NASPY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.15e-35Nin-like family protein