PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.1884

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CPP

Protein Properties

Length: 523aa MW: 55809.4 Da PI: 7.7331

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.1884	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.1	2.6e-16	151	190	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e evm.model.AsparagusV1_05.1884 151 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 190 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MEQGTSSGPS DFAPKKLVRQ LDFTTSYGRG GPPAMAAEAA AAAADPQPAA AATPPAASNI 60 AAFGSNLSVS VSLLQFGLRS LLKFKSLLGV YCDGCNCANC CNNVENEAAR HEAVEATLER 120 NPNAFRPKIG SSPHAIRASR EEAGDLAMVG KHNKGCHCKK SGCLKKYCEC FQANILCSEN 180 CKCMDCKNFE GSEERKALFH GDHGNPLTYM NQAANAVLNG AVGPSSYGSP AARKRKNQEL 240 FYPTSVKDQP VHRLAPFPQA SQLRTSGPPS SSIPVPRTVN PTPLGSSKVT YRSLLADIVQ 300 QEDAKELCRI LVLVSGEAAK AHSDKKVQEE KPAEGEEQTE SSLASSNHVR DERQRDADIQ 360 KASVDDRSSG THADKTSAEE SGSDSADGHK GSRPMSPGTL ALMCDEQDTM FMTSRNPSTS 420 PRFQSNQRVS EVYADQERGV LTAFRDSLLK LINCGKVKEA KYTSTSYQEP DINGIARTMP 480 PNSAQVPQTV NPIHVSSNNN LPPKAGLPVT DGGGLKPKLE NT*

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MEQGTSSGPS DFAPKKLVRQ LDFTTSYGRG GPPAMAAEAA AAAADPQPAA AATPPAASNI  60
AAFGSNLSVS VSLLQFGLRS LLKFKSLLGV YCDGCNCANC CNNVENEAAR HEAVEATLER  120
NPNAFRPKIG SSPHAIRASR EEAGDLAMVG KHNKGCHCKK SGCLKKYCEC FQANILCSEN  180
CKCMDCKNFE GSEERKALFH GDHGNPLTYM NQAANAVLNG AVGPSSYGSP AARKRKNQEL  240
FYPTSVKDQP VHRLAPFPQA SQLRTSGPPS SSIPVPRTVN PTPLGSSKVT YRSLLADIVQ  300
QEDAKELCRI LVLVSGEAAK AHSDKKVQEE KPAEGEEQTE SSLASSNHVR DERQRDADIQ  360
KASVDDRSSG THADKTSAEE SGSDSADGHK GSRPMSPGTL ALMCDEQDTM FMTSRNPSTS  420
PRFQSNQRVS EVYADQERGV LTAFRDSLLK LINCGKVKEA KYTSTSYQEP DINGIARTMP  480
PNSAQVPQTV NPIHVSSNNN LPPKAGLPVT DGGGLKPKLE NT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-123	CPP family protein