PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.1852

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 449aa MW: 50640.3 Da PI: 7.3964

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.1852	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.7	8e-31	97	150	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv ave+LGG+e+AtPk +l++m+v gL+++h+kSHLQ+YR+ evm.model.AsparagusV1_05.1852 97 PRLRWTPDLHRSFVLAVERLGGQERATPKLVLQMMNVRGLSISHIKSHLQMYRS 150 8****************************************************7 PP
2	Myb_DNA-binding	44.9	2.6e-14	98	149	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v av++lGg t+k++ ++m+ g++ ++ks++q+y+ evm.model.AsparagusV1_05.1852 98 RLRWTPDLHRSFVLAVERLGGQeraTPKLVLQMMNvRGLSISHIKSHLQMYR 149 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MERGKEVLGF EESLQSRRLS PMLDLNEDAV KDEDREEQGN DGEGQESTTE ATEGGSSSNN 60 SGSADDNNDG DNKKNILLED SNERKSTVRQ YNRSKMPRLR WTPDLHRSFV LAVERLGGQE 120 RATPKLVLQM MNVRGLSISH IKSHLQMYRS KKLDDSGQEK SNMSSSGTSR TDIYFSRRDH 180 ISDMFYKRRN LMENKALSQS KNVSNLQHFY NLLGQSTPPQ PCSFRQLQCA FSQKMATRTS 240 SVEDMVFQKE GKPTSHLFDV RDTLNARNGN ATTVDEVHDQ KVNEIAKFSA LVKQASTGST 300 IELNTARNYY NNNISNIKKT ESLQHDTIAI NESFGHTFGH SFSLEQQEDH ANSHKRKFDD 360 MFNIGKTTIS EKKKMKCTPN LQLSLRPISL GNGINNEKDT ETEEADTMLS LSLSPPICTK 420 EARNFTIQEF SVKEFLKSNL AATRPLQG*

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MERGKEVLGF EESLQSRRLS PMLDLNEDAV KDEDREEQGN DGEGQESTTE ATEGGSSSNN  60
SGSADDNNDG DNKKNILLED SNERKSTVRQ YNRSKMPRLR WTPDLHRSFV LAVERLGGQE  120
RATPKLVLQM MNVRGLSISH IKSHLQMYRS KKLDDSGQEK SNMSSSGTSR TDIYFSRRDH  180
ISDMFYKRRN LMENKALSQS KNVSNLQHFY NLLGQSTPPQ PCSFRQLQCA FSQKMATRTS  240
SVEDMVFQKE GKPTSHLFDV RDTLNARNGN ATTVDEVHDQ KVNEIAKFSA LVKQASTGST  300
IELNTARNYY NNNISNIKKT ESLQHDTIAI NESFGHTFGH SFSLEQQEDH ANSHKRKFDD  360
MFNIGKTTIS EKKKMKCTPN LQLSLRPISL GNGINNEKDT ETEEADTMLS LSLSPPICTK  420
EARNFTIQEF SVKEFLKSNL AATRPLQG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-36	G2-like family protein