PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.1800

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TCP

Protein Properties

Length: 345aa MW: 38112.3 Da PI: 6.5662

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.1800	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.3	1.4e-34	88	186	1	89
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............... 65 a+g+kdrhsk++T++g RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l ++ evm.model.AsparagusV1_05.1800 88 ATGRKDRHSKVYTAKGVRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDQLDELppwhpnattyfeeqp 167 589**************************************************************555554444444333 PP TCP 66 .........ssssaseceaesssssasnsssg.......k 89 + + + evm.model.AsparagusV1_05.1800 168 naatapflsP---------------------SldsdaitQ 186 2222222220.....................022222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MLAPLNLMLE EESEKKRLRS QLDPWKTHFH PVTTDIGEIG GKQEGDEGCH QHENQIRGSI 60 LQQAPLPKKP SSISGKIIPA NGGHIVRATG RKDRHSKVYT AKGVRDRRVR LSAHTAIQFY 120 DVQDRLGYDR PSKAVDWLIK NAKAAIDQLD ELPPWHPNAT TYFEEQPNAA TAPFLSPSLD 180 SDAITQFNPQ NLLSRASSQD QDLRLSLQSS QGQTPNILSA SEHMGFDVSS GIPWSMGDNS 240 DRSGGFVFSP QEVLGDSQLY THREPLQSSN SPSMCAWNAP VAAATGHQMH HSLFRPLSPS 300 VQDMGFASSS RDFSGFRIPQ RIEGKEEHDA RAEDKPESAS DCHY*

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MLAPLNLMLE EESEKKRLRS QLDPWKTHFH PVTTDIGEIG GKQEGDEGCH QHENQIRGSI  60
LQQAPLPKKP SSISGKIIPA NGGHIVRATG RKDRHSKVYT AKGVRDRRVR LSAHTAIQFY  120
DVQDRLGYDR PSKAVDWLIK NAKAAIDQLD ELPPWHPNAT TYFEEQPNAA TAPFLSPSLD  180
SDAITQFNPQ NLLSRASSQD QDLRLSLQSS QGQTPNILSA SEHMGFDVSS GIPWSMGDNS  240
DRSGGFVFSP QEVLGDSQLY THREPLQSSN SPSMCAWNAP VAAATGHQMH HSLFRPLSPS  300
VQDMGFASSS RDFSGFRIPQ RIEGKEEHDA RAEDKPESAS DCHY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-58	TCP family protein