PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.1417
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 344aa    MW: 38818.3 Da    PI: 5.9167
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.1417genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH57.32.8e-1852101255
                                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    r +h++ E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  evm.model.AsparagusV1_05.1417  52 RSKHSATEQRRRSKINDRFQILRDLIPHS----DQKRDKASFLLEVIEYIRFLQ 101
                                    889*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MESVSRSSRG FPDEDEEDED EYSRRESSFP KGDLTVKVDG KNVEQKQPST PRSKHSATEQ  60
RRRSKINDRF QILRDLIPHS DQKRDKASFL LEVIEYIRFL QEKVQKYESY PDMPWVKTFF  120
RSLWEKARNT TQGPGDGPAA PGYVFSGNDN NXXXXXXLQN LKGSGFAQPQ QRLISESNNI  180
ASQSQWLRPT CPSDGAMNSE MLNEQEELMI DEGTISVSHT YSQGSGFSLV SDVSFGWPLV  240
SAVGLCFNFV HGSACSRHQF QLLVFKLFST LVGLWFQLML GICFNFVHGF SLLLALVSAL  300
AWPLVSVDAW HLFQFCAWFQ PALGLGFSSC LAFGWSAMTG LWF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.15e-32bHLH family protein