PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.139
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 343aa    MW: 37638.7 Da    PI: 4.9459
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.139genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.61.1e-13113164155
                                   CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   ++++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YIk+Lq
  evm.model.AsparagusV1_05.139 113 QKVSHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYIKELQ 164
                                   6899*************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MAEGLSEFFE AVEFRSTNLT GAASPENLFS MFETFEDATT DLITLAPFEE EPNLSPKETQ  60
KTQSSPTLKR SNTLKLRLDE VDEDGGDEAS LARKKLKFAA AVSLEEEVQD GQQKVSHITV  120
ERNRRKQMNE HLSVLRSLMP CFYVKRGDQA SIIGGVVDYI KELQQVLQSL EAKKQRKAYT  180
EVLSPRPTIS SPRPPQLPLS PRPSPLSPRI GLPISPRTPQ PSSPYKLPIR VSPIHESSSS  240
LDTASSINNS GELAAAANFK SPLADVEVKF SGPNVMVNTV SSRIPGQMTK IVAALEGHSL  300
EILQLNINNI DDTMMNSFTI KIGIECELSA EELAQEILQT FS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.15e-86bHLH family protein