PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.1318 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 231aa MW: 26410.4 Da PI: 8.4652 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.7 | 2.5e-33 | 78 | 135 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+H+h+ evm.model.AsparagusV1_05.1318 78 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYQDPSIVITTYEGQHTHQ 135 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MNGDDGDDDD ASKMQLLKKI NIVGEPQQLK NDPDEVEGDN CGDKSNKVKK GAARKKGEKR 60 QREPRFAFMT KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCTV KKRVERSYQD 120 PSIVITTYEG QHTHQSPATV RGSSHLLAPP PLSSMHPSFH QEHHHLLMPH LHPQLININN 180 NNSNNYLQNL IQSISPFQQQ QQHLGQLPDH HYGLLQDIVP STFNDDNQLP * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 4e-50 | WRKY family protein |