PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.1230 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 73aa MW: 8269.31 Da PI: 5.8387 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.1 | 6.3e-11 | 6 | 52 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT +++ +a + + ++ +W+ +ar +g g+t++++k ++q + evm.model.AsparagusV1_05.1230 6 QWTSKQNKIFEKALAVYDKDtpsRWENVARAVG-GKTAEEVKRHYQVL 52 7********************************.************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 73 aa Download sequence |
MASTSQWTSK QNKIFEKALA VYDKDTPSRW ENVARAVGGK TAEEVKRHYQ VLEEDIKQIE 60 SGLLCYSYIS IE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 9e-30 | MYB_related family protein |