PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.942
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 401aa    MW: 45284.8 Da    PI: 8.9065
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.942genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.10.00077131155630
                                   HHHHHHHHHHHHHHHHHHHCTSCCC CS
                           HLH   6 nerErrRRdriNsafeeLrellPka 30 
                                   +++ r RR+ri ++ +eL +l+P  
  evm.model.AsparagusV1_04.942 131 SIAARERRKRISQKTQELGKLIPGE 155
                                   67889******************74 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MDASPSVVFI KVWALQAKSG QNKKDISVIE EEDAKVEGTR FGFENKKDIS VIEEEDAKVE  60
GTRFGFVWDK AGHIVTNYHV INKSATDQSG LRRCETLRGN PCVEFAVTPR FNGEEKKKDS  120
GSGDRVLSAQ SIAARERRKR ISQKTQELGK LIPGENRTLL RCFRLHLTII TNNNGYYRKK  180
LPSPLSGVFY EVGNEFDEDS VFVSTPTNHL QQEDSIGFGI KSVLGFLPQH HKLLVRSSCN  240
GLILCSTRPD KCLYVSNPAT KRYHKIPEPA DDHPYQMALA FDPCLSPHYK VVAMINRRDT  300
NCMEILSSET REWVRYEDCK GRINHAYTNV SAFVRGNLHF MDLYGSFIVA VDLKKKVCRE  360
IETPRTKIPI RMGCIQQFGG NLRCALRARE DICLGFGGLR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.15e-06bHLH family protein