PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.76
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 263aa    MW: 30008.4 Da    PI: 5.0762
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.76genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.13.1e-16552148
                                 TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
              Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                 +g+WT++Ed  lv +++++G g+W++ ++  g+ R++k+c++rw +yl
  evm.model.AsparagusV1_04.76  5 KGPWTEDEDMVLVSYIQRYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 52
                                 79******************************99************97 PP
2Myb_DNA-binding50.16.4e-1658103148
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
              Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                  rg+++ eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l
  evm.model.AsparagusV1_04.76  58 RGNFSREEEDMIINLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 103
                                  89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGLKKGPWTE DEDMVLVSYI QRYGHGNWRA LPKQAGLLRC GKSCRLRWTN YLRPDIKRGN  60
FSREEEDMII NLHEMLGNRW SAIAARLPGR TDNEIKNVWH THLKKRLQKP ADHSVQESNS  120
KVRPAESKTA QVESKSIKLI HQNSVEFASN PTVMQTIPIQ SSSEDNSTGS ISSNWSSSEI  180
SGYDMGYLRN ESMESLSQEH MATIDDSFWN EAFSMDLALV RGDASCNFDE QSDLNSLVYD  240
EDVEFWLRTF TEVGELHDFP EL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.14e-72MYB family protein