PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.724

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

E2F/DP

Protein Properties

Length: 469aa MW: 51568.8 Da PI: 4.7745

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.724	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	83.5	1.8e-26	143	208	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i wkg evm.model.AsparagusV1_04.724 143 RYDSSLGLLTKKFINLLKHAQDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRICWKG 208 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MSGGRAAAKF SGQPSGQVFQ PLKRHLPFPS KTPSRFVDPD AYHSFDSVNR RIDDDGADEL 60 VIRTPLKRKT DVDNAEAAES NEWTYSPGYV EGINSPLQTP ISGKGDKILD KSNPLKYSKP 120 GSAIPIPNAG SPSNVLTPVG TCRYDSSLGL LTKKFINLLK HAQDGILDLN KAAETLEVQK 180 RRIYDITNVL EGIGLIEKKL KNRICWKGID ESRPGGTDDG VPILQEEVEK LHVKERNLDS 240 QISQLRERLR DFSEDESSQK WLYVTEEDIK AIPCFQNETL IAIKAPHGTT LEVPDPDEVV 300 DYPQRRYRIV LRSTMGPIDV YLVSKFEETI EQVSATVASP SPPPVSHSGS TQNDMVTVRQ 360 GHESGGKELD VQGAPMMSAD PNLLQDPIGG MKKIVPSDVD SDADYWLLSD DPGVSITDMW 420 KTAPDDVQWD TEPRLNAEDF LASSPQTPPA GVVEAPFSNS TPRRKQGV*

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MSGGRAAAKF SGQPSGQVFQ PLKRHLPFPS KTPSRFVDPD AYHSFDSVNR RIDDDGADEL  60
VIRTPLKRKT DVDNAEAAES NEWTYSPGYV EGINSPLQTP ISGKGDKILD KSNPLKYSKP  120
GSAIPIPNAG SPSNVLTPVG TCRYDSSLGL LTKKFINLLK HAQDGILDLN KAAETLEVQK  180
RRIYDITNVL EGIGLIEKKL KNRICWKGID ESRPGGTDDG VPILQEEVEK LHVKERNLDS  240
QISQLRERLR DFSEDESSQK WLYVTEEDIK AIPCFQNETL IAIKAPHGTT LEVPDPDEVV  300
DYPQRRYRIV LRSTMGPIDV YLVSKFEETI EQVSATVASP SPPPVSHSGS TQNDMVTVRQ  360
GHESGGKELD VQGAPMMSAD PNLLQDPIGG MKKIVPSDVD SDADYWLLSD DPGVSITDMW  420
KTAPDDVQWD TEPRLNAEDF LASSPQTPPA GVVEAPFSNS TPRRKQGV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-127	E2F/DP family protein